YRC Public Data Repository - Protein Structure Prediction

Protein:	CE07912
Organism:	Caenorhabditis elegans
Length:	241 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07912.

Description	E-value	Query Range	Subject Range
gi\|88795676, gi\|... - gi\|88795676\|ref\|ZP_01111369.1\| phosphoglycolate phosphatase [Alteromonas macleodii 'Deep ecotype'], ...	152.0	[0..19]	[241..1]
gi\|229811380, gi... - gi\|229845694\|ref\|ZP_04465817.1\| phosphoglycolate phosphatase [Haemophilus influenzae 6P18H1], gi\|229... gi\|144985848, gi... - gi\|145633479\|ref\|ZP_01789208.1\| phosphoglycolate phosphatase [Haemophilus influenzae 3655], gi\|14498... GPH_HAEI8 - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain 86-028NP) GN=NTHI0697 PE=3 SV=1	147.0	[0..20]	[241..1]
gi\|86147334, gi\|... - gi\|86147334\|ref\|ZP_01065648.1\| phosphoglycolate phosphatase [Vibrio sp. MED222], gi\|85834899\|gb\|EAQ5...	146.0	[0..19]	[241..1]
gi\|90406956, gi\|... - gi\|90406956\|ref\|ZP_01215147.1\| phosphoglycolate phosphatase [Psychromonas sp. CNPT3], gi\|90311998\|gb...	146.0	[0..19]	[232..1]
gi\|145272121, gi... - gi\|145638526\|ref\|ZP_01794135.1\| phosphoglycolate phosphatase [Haemophilus influenzae PittII], gi\|145... gi\|53733330 - gi\|53733330\|ref\|ZP_00156383.2\| COG0546: Predicted phosphatases [Haemophilus influenzae R2866]	146.0	[0..20]	[241..1]
GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) G... GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae GN=gph PE=3 SV=1	146.0	[0..20]	[241..1]
GPH_PASMU - Phosphoglycolate phosphatase OS=Pasteurella multocida (strain Pm70) GN=gph PE=3 SV=1 GPH_PASMU - Phosphoglycolate phosphatase OS=Pasteurella multocida GN=gph PE=3 SV=1	145.0	[0..21]	[241..1]
gi\|91721344, gi\|... - gi\|91769555\|ref\|ZP_01271388.1\| 2-phosphoglycolate phosphatase, prokaryotic:HAD-superfamily hydrolase...	145.0	[0..17]	[235..1]
GPH_MANSM - Phosphoglycolate phosphatase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=MS2331 PE=3 SV=1	144.0	[0..20]	[241..1]
gi\|114332863, gi... - gi\|69950160\|ref\|ZP_00638092.1\| 2-phosphoglycolate phosphatase, prokaryotic:HAD-superfamily hydrolase...	144.0	[0..18]	[232..1]

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Predicted Domain #1

Region A:
Residues: [1-241]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSTAPSSA SSDADSLNHD ENPIKAVIFD YGEVMWMQSR NVHVYRKIEE DNKLFDNSLI  60
   61 PTLVSKELSS ILPKGFQEDL LTGIYTAKDF DRLFLSAYNR KFGSQVESLK FFSATEYDND 120
  121 AVYEEAVLTA CQKLRERGVK TILMLDTYHV DEKRNGRRIP NMEKYFDHVI ESCKEGVKKP 180
  181 DPRFYQIALD CVDVQPEEVI YIDDSKINCE SAAVLGIRYI QVFNSMDMLE DLQEILGFDL 240
  241 D

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.30103
Match:	2hszA
Description:	No description for 2hszA was found.

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.02290994020378	bayes_pls_golite062009
hydrolase activity	0.71914501009647	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: