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View Structure Prediction Details

Protein: CE07656
Organism: Caenorhabditis elegans
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07656.

Description E-value Query
Range
Subject
Range
gi|39592987, gi|... - gi|39592987|emb|CAE62601.1| Hypothetical protein CBG06717 [Caenorhabditis briggsae], gi|187034261|em...
253.0 [0..1] [244..1]
CE19269 - status:Partially_confirmed UniProt:Q9XTE8 protein_id:CAB03271.1
243.0 [0..1] [241..1]

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Predicted Domain #1
Region A:
Residues: [1-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSFSRAVII FFTIFPLISA TGHLRLELTS SKNFILQLKT NTSFQEIQLA MGNPRTLSFH  60
   61 PKDHQETLEI SFSNNVSDLT TVEYHMNSNE LNTYQTILFS DAVLLVQSVF KCDTGFVGDK 120
  121 CQDIITSTST TVISTTTTEI KTSTTKVIIV INDVPKEASA LQQSISLNVI HCSVLIVIII 180
  181 VLLILIIIVY IFLRPHHQKH VYIQPESPAQ NERKCSVLLE ESGYFSPLES PRYTEAPHTF 240
  241 LKVSY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle