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View Structure Prediction Details

Protein: CE07639
Organism: Caenorhabditis elegans
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07639.

Description E-value Query
Range
Subject
Range
gi|20808521, gi|... - gi|20808521|ref|NP_623692.1| NADH:flavin oxidoreductase [Thermoanaerobacter tengcongensis MB4], gi|2...
gi|20808521 - gi|20808521|ref|NP_623692.1| NADH:flavin oxidoreductase, Old Yellow Enzyme family [Thermoanaerobacte...
389.0 [0..12] [445..5]

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Predicted Domain #1
Region A:
Residues: [1-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYSRIAASS VNTAVLGEPL NFRNGKKANN RILKSPLSEK MYRWNEHIEE KLGLPTDEII  60
   61 NLYSHWGNGG FGLIITGNLA VDPKFIGEAG QGILSIENTS AESLKIFSRL AQAMKSDGAL 120
  121 AIAQTNHIGV QAQTAYTNSL GEQHILVKEV ANPMNFSVQQ IKENVLKRFA NAASVLYESG 180
  181 FDGMEIHSAH GMIFNQFLAP KNTRNDEYGG SIENRARLLT ETYKAVREVV PESTGFIVGV 240
  241 KLNSRDFQES GISREDIIKV CELIENSGFD FVELTGGAME SVVKEVQKRH STIAREDFFL 300
  301 DFVQFTSKIF KETVVYITGR WQTANAMVTS VNMGLTSGVG LGRWSCSEPD FPRKLIAGEI 360
  361 FSCPDLKFAP SEFLIAKHAA HFHIKQMSEH MYDSQNSTST TVTDFTVEDE ANNFKKACGA 420
  421 YKTELEPIGG YDRFAGVIKY VPLNKST

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.0
Match: 1ps9A
Description: The Crystal Structure and Reaction Mechanism of E. coli 2,4-Dienoyl CoA Reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.31793084876503 bayes_pls_golite062009
oxidoreductase activity 1.59709503080261 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle