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View Structure Prediction Details

Protein: CE07200
Organism: Caenorhabditis elegans
Length: 205 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07200.

Description E-value Query
Range
Subject
Range
CE26286 - status:Predicted UniProt:Q9GUG0 protein_id:AAG23472.1
298.0 [0..1] [205..1]
gi|157755465 - gi|157755465|ref|XP_001670076.1| Hypothetical protein CBG21685 [Caenorhabditis briggsae AF16]
gi|39586378, gi|... - gi|39586378|emb|CAE74035.1| Hypothetical protein CBG21685 [Caenorhabditis briggsae], gi|187022429|em...
181.0 [0..11] [181..34]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPDDDMIV DSSPTATIPP TCDNILRNQN LPSTPASGQP SIKELIERIT ILEKTVKEQS  60
   61 KKIAELEATK GFPLITND

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASKSKSKLYS AVVQNDPQSV KIIEKAHFAA DLRKLGENSI YAIIENVPDC KKEEQTTIDA  60
   61 SLMENLAKLD TLPKPEQFFR IKCKKPDVPS RPLKVKFATE YQRDTFIRQF SKALHNLPER 120
  121 PVSSRTI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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