YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: asg-2
Organism: Caenorhabditis elegans
Length: 131 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for asg-2.

Description E-value Query
Range
Subject
Range
gi|12842190, gi|... - gi|12842190|dbj|BAB25507.1| unnamed protein product [Mus musculus], gi|12841973|dbj|BAB25423.1| unna...
206.0 [0..1] [115..1]
gi|157770324 - gi|157770324|ref|XP_001676982.1| Hypothetical protein CBG10906 [Caenorhabditis briggsae AF16]
gi|39586757, gi|... - gi|39586757|emb|CAE65799.1| Hypothetical protein CBG10906 [Caenorhabditis briggsae], gi|187030681|em...
200.0 [0..1] [131..1]
asg-1 - ATP synthase subunit g status:Confirmed UniProt:P90921 protein_id:CAB03179.1
195.0 [0..1] [130..1]
gi|47058994, gi|... - gi|47058994|ref|NP_997681.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G [Rat...
188.0 [0..1] [107..1]

Back

Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPKLGFFE KIANLTGALY RHQHAQFPRR FAILKAVGKH ELAPPRQADW PAIKADWAKV  60
   61 QSFIQTGGYK NLSIREGLVY TAVTLEVVFW FFVGEMIGRR YIFGYLVPAD YVSKSTKKTV 120
  121 KEQEALAALE N

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 53.070581
Match: PF04718.6
Description: No description for PF04718.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.851 N/A N/A d.2.1 Lysozyme-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle