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View Structure Prediction Details

Protein: CE06675
Organism: Caenorhabditis elegans
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06675.

Description E-value Query
Range
Subject
Range
gi|157755025 - gi|157755025|ref|XP_001669856.1| Hypothetical protein CBG11663 [Caenorhabditis briggsae AF16]
SHE1_CAEBR - F-box protein she-1 OS=Caenorhabditis briggsae GN=she-1 PE=1 SV=1
194.0 [0..4] [197..19]
fbxa-145 - status:Partially_confirmed UniProt:O01573 protein_id:AAB52344.2
183.0 [0..5] [198..14]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEPEFESNW CDLPPEFKQQ CIQKMPITEE RDLVDLTKFH LRKVEIDSNR IKLEEAGDDY  60
   61 LNLDIELNYR DNRIETHMIP LLDYIFKGGI IKKLQISDTN FDRNKETIIK KMTPMLQERV 120
  121 LQVKKIILTF TNNARSQFLL SKCDERYLEV VELFDWYDSF GIVGLPIKFI ANDAVIGTDY 180
  181 RFYTFDQEEI GSSPRKIRRS CCVSIYKQQF II

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle