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View Structure Prediction Details

Protein: asic-2
Organism: Caenorhabditis elegans
Length: 545 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for asic-2.

Description E-value Query
Range
Subject
Range
gi|114644825 - gi|114644825|ref|XP_001155207.1| PREDICTED: amiloride-sensitive cation channel 2, neuronal isoform 1...
gi|156103611, gi... - gi|21536349|ref|NP_001086.2| amiloride-sensitive cation channel 2, neuronal isoform b [Homo sapiens]...
401.0 [0..10] [533..18]

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Predicted Domain #1
Region A:
Residues: [1-545]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGGGFVQIF KDFSNWSTVA VVPHVANANN KISRIFWIAI FLFVLGMFAY ELYILIAKFF  60
   61 SYPATVNTEI LFEKQIFPVV TVCNMNPYKY SVVKSNSAFS SVNTLMTTYS DATVGTFSTD 120
  121 KWGLYADNDE TYDLDSRAAD ALVLEANLIS DTAKVPALYT YADLIQDCSF AGIPCSESDF 180
  181 TKFIDPVYGA CYSFNEDASL NYSVSREGIQ FGLKLMLTVT QTKTNGNTDS LPTTKLAGAR 240
  241 IGVNSRGSSP GLDSNGIDAG VGYESAVSVS LTQNVRAKKP YGTCVDREPD SSDYYKDFIY 300
  301 TLETCFNGCK QRDTIAKCQC ANPRLALGST DTACQPIKAD LDCLQTLKGN QTSSTPNIDL 360
  361 LVECNCNPPC DESTYTPTVS LAQFPSTSYY VATSSTAGVG SCSSTNSKFS SKSDCQKWYN 420
  421 NNGMIIQVFL ETLSYELYTE TAGYTVSNVI NDLGGQAGLW LGLSVISVVE MTGLMLVMGA 480
  481 FCVTGGAIKM APDDDEIEND HRIKDVEDVK KEIDHLEKKH GEMESGSDGE VDDIENKGDE 540
  541 EKKKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.221849
Match: 2qtsA
Description: No description for 2qtsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle