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View Structure Prediction Details

Protein: CE06303
Organism: Caenorhabditis elegans
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06303.

Description E-value Query
Range
Subject
Range
gi|39579955, gi|... - gi|39579955|emb|CAE56142.1| Hypothetical protein CBG23755 [Caenorhabditis briggsae], gi|187040794|em...
210.0 [0..1] [347..1]

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Predicted Domain #1
Region A:
Residues: [1-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFFGVRTVQ IASLAGFSWG GSKLDDIQTA KLRTCPIQVQ QPEKVQNDVL LSRKVINHLD  60
   61 KSNLKLRLYQ YETCPFCCKV RAFLDYHGFS YEVVEVNPVT RSQIKFSTTY KKVPILRSGE 120
  121 TTMTESTLII STLATYLQRP DQSLDQIIQM YPAVDSTNEK GKPVLNYPNK FFVMKGKVDG 180
  181 DANMASAREE REWREWVDNW FIHLISPNVY RNWNESVETF RWFEQVGDWH RTFPAWERVL 240
  241 AVYVGAAAMF LLSKTLKKKH NINDEREELR KACRDWMAAI GPNRQFLGGD EPNLADLSLY 300
  301 GAMNSFYGCS AFKEVILEEK IAEWWRKMDA LVKNHDGRKA LESRSQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.522879
Match: 1z9hA
Description: Microsomal prostaglandin E synthase type-2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142133664747919 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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