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View Structure Prediction Details

Protein: arx-2
Organism: Caenorhabditis elegans
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for arx-2.

Description E-value Query
Range
Subject
Range
gi|109489498 - gi|109489498|ref|XP_001076100.1| PREDICTED: similar to Actin, cytoplasmic 2 (Gamma-actin) [Rattus no...
507.0 [0..3] [391..311]

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Predicted Domain #1
Region A:
Residues: [1-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSQGRKVIV VDNGTGFVKC GYAGTNFPAH IFPSMVGRPI VRSTQRVGNI EIKDLMVGEE  60
   61 CSQLRQMLDI NYPMDNGIVR NWDDMAHVWD HTFGPEKLDI DPKECKLLLT EPPLNPNSNR 120
  121 EKMFQVMFEQ YGFNSIYVAV QAVLTLYAQG LLTGVVVDSG DGVTHICPVY EGFALHHLTR 180
  181 RLDIAGRDIT KYLIKLLLQR GYNFNHSADF ETVRQMKEKL CYIAYDVEQE ERLALETTVL 240
  241 SQQYTLPDGR VIRLGGERFE APEILFQPHL INVEKAGLSE LLFGCIQASD IDTRLDFYKH 300
  301 IVLSGGTTMY PGLPSRLEKE LKQLYLDRVL HGNTDAFQKF KIRIEAPPSR KHMVFLGGAV 360
  361 LANLMKDRDQ DFWVSKKEYE EGGIARCMAK LGIKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 2p9kB
Description: No description for 2p9kB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle