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View Structure Prediction Details

Protein: gsnl-1
Organism: Caenorhabditis elegans
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gsnl-1.

Description E-value Query
Range
Subject
Range
GELS_CHICK - Gelsolin OS=Gallus gallus GN=GSN PE=2 SV=1
534.0 [0..3] [464..48]

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Predicted Domain #1
Region A:
Residues: [1-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGTSLDPAL AEIGKKNGLL VWRINKFVLE PVPEVDHGVF YIGDAYIALY QKYDGCWDVH  60
   61 FWLGKNASTD EIGVAAIKTV EIDDSLGGIP TQHREIQNYE SPLFLSYFPD GIRYVSGGYE 120
  121 SGYRHVDDQF KNWKPHLFHC KGKRNVRCTE VECEVNSLNL GDVFILDLGK DLYVWMPPES 180
  181 GRLERIKGMA RAKNIADHER MGIPKVHILD DVEWDNDSTF WSYFGGVSSV RKVSKGKDDD 240
  241 DNYWKRLTEQ ITLWKVSDAS GAAKVSMVSQ GENIRKEQLD PKDAFILDAI NGGIFVWIGH 300
  301 ECTLEERSKA LIWGQNYLKQ HHLPRWTQVT RVLESAESTQ FTQWFRDWVD EKKKNTFTPL 360
  361 LFQVSDESGL LHVEEIANFT QEDLDGDDVM ILDALNSIYV WVGANANANE KKEALNTAKL 420
  421 YLEKDKLPRH KKTAIDTIFQ GKEPPTFKKF FPSWDDNLFK NEVRSVQNMR RLLFH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 149.0
Match: 2fghA
Description: No description for 2fghA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle