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View Structure Prediction Details

Protein: CE05969
Organism: Caenorhabditis elegans
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05969.

Description E-value Query
Range
Subject
Range
gi|20808521, gi|... - gi|20808521|ref|NP_623692.1| NADH:flavin oxidoreductase [Thermoanaerobacter tengcongensis MB4], gi|2...
gi|20808521 - gi|20808521|ref|NP_623692.1| NADH:flavin oxidoreductase, Old Yellow Enzyme family [Thermoanaerobacte...
386.0 [0..1] [448..1]

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Predicted Domain #1
Region A:
Residues: [1-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRFPHAATV SSKVLGGKLN FPNGITAQNR FMKAAMTERL ATYSLDDFKN HGLPTEQILN  60
   61 IYDKWGHGQF GMIITGNVCV DPINLEAAGN AIIFKEGESS KRRNLFSQWA QKIKQDGSLA 120
  121 IMQLSHAGRQ ASVFVNPTPY GVSDIELKTD PPGSMYGKPI ALTTDQIKTE VVDRFVYAAK 180
  181 FAYECGFDGV QLHGAHGYLL TQFTSPTTNN RNDKYGGSIE NRNRVIIEIY DEIRKEIPET 240
  241 SGFLIGIKTN SKEFQDKGTT VEDAKQMCIE YEKRGFDFVE LTGGTAEKFV FAHQRESTVI 300
  301 REAFFVEFAE TIRPVFKNTV VYLTGGFRTT GAMVDAITRN TTQGIGLGRP ATAEPDLPKK 360
  361 LLNGDVPSAV KDEFNPNDMI KQIMASGSQI EQMARNSVEG AGGNVMDQIT DYSDEKMVAL 420
  421 FTEKAAQLFV DAAKDALAGK IPKNIVIMN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.221849
Match: 1ps9A
Description: The Crystal Structure and Reaction Mechanism of E. coli 2,4-Dienoyl CoA Reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity 2.36642953353273 bayes_pls_golite062009
catalytic activity 2.31793084876503 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 0.95357258623775 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle