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View Structure Prediction Details

Protein: hrg-4
Organism: Caenorhabditis elegans
Length: 207 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hrg-4.

Description E-value Query
Range
Subject
Range
hrg-1 - status:Confirmed UniProt:Q21642 protein_id:AAA96185.2
228.0 [0..13] [184..3]
gi|157756015 - gi|157756015|ref|XP_001670351.1| Hypothetical protein CBG05989 [Caenorhabditis briggsae AF16]
gi|187034555, gi... - gi|39593690|emb|CAE61982.1| Hypothetical protein CBG05989 [Caenorhabditis briggsae], gi|187034555|em...
222.0 [0..39] [189..1]
gi|47229221 - gi|47229221|emb|CAG03973.1| unnamed protein product [Tetraodon nigroviridis]
46.0 [0..53] [192..6]

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Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHAFLVIKY YWHIFFVEFS KCTSSTRGSA KKEHVNYRMT AENRGFCQLI CHINVRIGWT  60
   61 IFGIVFGISA ILTYAIKFHN WSATATTAIA TLFACETLYL YWALKKNTIV NWKSSTFQLM 120
  121 IWPNVFIGLL GLLGCLVCYI IAGITHQGAG SIQAMYGENL WFTGSWSLVI TKWTWQNAFF 180
  181 ARKYLNKIGT ASEDGDIDDD DVEVIKS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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