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View Structure Prediction Details

Protein: CE05774
Organism: Caenorhabditis elegans
Length: 298 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05774.

Description E-value Query
Range
Subject
Range
CE05775 - member of worm-specific protein family status:Predicted UniProt:Q19944 protein_id:CAA93750.1
515.0 [0..5] [285..3]
gi|187031405, gi... - gi|39590712|emb|CAE65082.1| Hypothetical protein CBG09940 [Caenorhabditis briggsae], gi|187031405|em...
gi|157774295 - gi|157774295|ref|XP_001665213.1| hypothetical protein CBG09940 [Caenorhabditis briggsae AF16]
253.0 [0..2] [149..1]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTPIEQSFQ HLADEPTSLN LIRFTAEMIE MTTELPFKKM QAGLIKSIAH ILHDEKFEKI  60
   61 RGPQAMLKLM MLAYYTTKVG VPEVDNHTYG LDMFNDYKQF FFQWAHGCGK KKAVSEFRTV 120
  121 FHLALSNLYY QMSPTLIVKD FEKIFQQYF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.814 N/A N/A a.118.19 Description not found.

Predicted Domain #2
Region A:
Residues: [150-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQLPMISGLE RKALDKLFGR GMIEKFAWAE NVMSFGNSRE LSGRTVAVRP DHRILEVARG  60
   61 TMISSSYISP NKSGSSVLLN ESPPTNSPIV KFGTYPKFQL QDVSSSMLNA RRRQLTATVT 120
  121 SAESPMKQPR MATGNFNDRA STSSGGPKN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle