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View Structure Prediction Details

Protein: CE05755
Organism: Caenorhabditis elegans
Length: 525 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05755.

Description E-value Query
Range
Subject
Range
gi|39593412, gi|... - gi|39593412|emb|CAE64882.1| Hypothetical protein CBG09694 [Caenorhabditis briggsae], gi|187031634|em...
gi|157763166 - gi|157763166|ref|XP_001673925.1| Hypothetical protein CBG09694 [Caenorhabditis briggsae AF16]
1002.0 [0..1] [525..1]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKIYVFFLT LCQILHKIET FEENTEFDVH VETLVNTKNG GDPSFLTKFV NDKGIPQGLK  60
   61 GENYINPSFC SNIDDQVLTD EKYSNCTILQ SKNGSVLKLN FWTNFDTFKF GVNLLELKNV 120
  121 TLELVYQTEL TYLYFTAFRK CEDCLFNFTK NPSLVGLRFW NLAHDPNLEN VPAKHRPKLY 180
  181 IRGNSRLSFT T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [192-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTGDRRKLLE LKKACNPEMC VIQNDEECHF RYPIKGSNEY QYCRHVYGDM HFTGTFRENN  60
   61 PAEMKFVIEG CFIFNRTKAQ YVRGLLKSFP KCSRQHIFEH NQYMCTDQLD QIKERWGHEK 120
  121 VKIISDGINV KCYQGECR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [330-525]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGFVSEAVKD RYSGCETFQG DVYLSETSGN LSERIKELSY AHTINGQLLI ANNPSITKLS  60
   61 FPFLKKIKST KCPALQISNM TNLEFLLFQS HVEFSCRRSG PIVMITNSSK LYLHHQMLRQ 120
  121 LRKVKAVLRH FDSKSDTYSE KTTYYLIGGC FVIAIFMEFI WFFRKNLLLP NFLYRLFPMR 180
  181 INRKPKQKHG KKKKED

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.79588
Match: PF01030.15
Description: No description for PF01030.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle