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View Structure Prediction Details

Protein: CE05649
Organism: Caenorhabditis elegans
Length: 91 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05649.

Description E-value Query
Range
Subject
Range
gi|157763072 - gi|157763072|ref|XP_001673878.1| Hypothetical protein CBG23057 [Caenorhabditis briggsae AF16]
gi|187021322, gi... - gi|39591909|emb|CAE75129.1| Hypothetical protein CBG23057 [Caenorhabditis briggsae], gi|187021322|em...
138.0 [0..1] [91..1]
CE00893 - status:Confirmed UniProt:Q17776 protein_id:CAA86410.1
113.0 [0..13] [89..22]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAALFLTIL AISDIVNGAP QAPTSCAIDE RAQIPCVCCK KDCWYSIAAA ATHELGHMPG  60
   61 EAGEREAMAT LKLIRACMIS ECSGICSASP F

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.830 d.6.1 Prion-like
View Download 0.673 d.6.1 Prion-like
View Download 0.592 d.43.1 Elongation factor Ts (EF-Ts), dimerisation domain
View Download 0.539 a.4.5 "Winged helix" DNA-binding domain
View Download 0.531 a.57.1 Protein HNS-dependent expression A; HdeA


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle