YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: tag-135
Organism: Caenorhabditis elegans
Length: 494 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-135.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
585.0 [0..2] [494..1177]

Back

Predicted Domain #1
Region A:
Residues: [1-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASVSDPYE QMPAAPTDDD LEDKPEADKK ALLNQVFKSL KRAQDLFYHD YAQPPPMPEE  60
   61 NDSLIRSMKR KHEYGNVIKK VEEMKVRREN EMLALPTSQP MHGTGSVIAS AGTPLAITDG 120
  121 SGKLVNQQQG SAKSGTLLPL VPLGNSSKGE DNTTRSLLPS KAPMMMKPKW HAPWKLYRVA 180
  181 SGHTGWVRAV DVEPGNQWFA SGGADRIIKI WDLASGQLKL SLTGHISSVR AVKVSPRHPF 240
  241 LFSGGEDKQV KCWDLEYNKV IRHYHGHLSA VQALSVHPSL DVLVTCARDS TARVWDMRTK 300
  301 AQVHCFAGHT NTVADVVCQS VDPQVITASH DATVRLWDLA AGRSMCTLTH HKKSVRALTI 360
  361 HPRLNMFASA SPDNIKQWKL PKGEFMQNLS GHNAIINTLS SNDDGVVVSG ADNGSLCFWD 420
  421 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.522879
Match: 1k32A
Description: Tricorn protease; Tricorn protease N-terminal domain; Tricorn protease domain 2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.60409960326459 bayes_pls_golite062009
hydrolase activity 0.320935567893193 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [421-494]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WRSGFCFQKI QTKPQPGSIE SEAGIYASCF DKTGLRLITA EADKTIKMYK EDDEATEESH  60
   61 PIVWRPEIVK KKAY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.154902
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle