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View Structure Prediction Details

Protein: CE05529
Organism: Caenorhabditis elegans
Length: 317 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05529.

Description E-value Query
Range
Subject
Range
gi|157763142 - gi|157763142|ref|XP_001673913.1| Hypothetical protein CBG09707 [Caenorhabditis briggsae AF16]
gi|39593424, gi|... - gi|39593424|emb|CAE64894.1| Hypothetical protein CBG09707 [Caenorhabditis briggsae], gi|187031622|em...
202.0 [0..1] [317..1]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVVLAISLA VTAVCAQYGS GPANNPPASS YSSNVYYPPP VYGSVYWDYD SGSREHRHKQ  60
   61 CPRLRAYVGE FPGIPEEAFY PPIIRYVKYN RKVTALVVCD RDEKNLNFLF ARHNKTRDVR 120
  121 SASVVAIGST AGVTLVCNRD DRRYEGFVID MNA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [154-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTNGFSKKIE ITQLTCLGLD KTIIGLPVEH GVQQLAQKIQ EILEDDFFVP VIPSRRKRQA  60
   61 GGATANSAES TTEAADTEST TEAAATETPA AESTTTEASA TDAAATEASA TDAAATEGAV 120
  121 TKAAAGVTEE SATEVITVAT TPASPDAALN NAINELGKIL GQVF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.04
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle