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View Structure Prediction Details

Protein: egl-47
Organism: Caenorhabditis elegans
Length: 488 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-47.

Description E-value Query
Range
Subject
Range
egl-47 - status:Confirmed UniProt:Q6QNE9 protein_id:CAH04730.1
770.0 [0..67] [488..101]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSFSNGSPL HIDLSQHHPD NHSHRNNIHK PNMDNLDNSD VENALILDNL DNHHMTSNEQ  60
   61 FPPSGRR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVHCVSNSLR SILFLFRLLA IFPATTDRKS RRKRNHRSII KLILYVNYIV LAVLLNSFLI  60
   61 KMNFKVLMLY KHKF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [142-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLMHTGTVAS MITATKPVIN VFVIVLSAIK FKSHQRLLKT IDMVDVCFRS AFGVSPPLRI  60
   61 YKFVFFFTLL IIFFSALILK VVEFVGTGEI FGEHILTDCS FILVPVLSLW NIIPLLYYHL 120
  121 YNILVRFYCR TLIKSMNREH KKRHFSLKFY YEQFTRITNV QEAVGDVFNP LLLFSLAWSL 180
  181 LVLCLTLYFL SE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [334-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTSTLLVPIT PEQVTNPKIR EKLNITVHVK ICWAAYQVVM AILHIIIICS TGMMTNETTR  60
   61 QIVNAVLRIV PDANADLDRF QISCFVHKMT TQFMWGMTVW RAFPLERTTF FTLISVIVTY 120
  121 SLLLFRFKDD MVQNPPYMAA MAVFNTSAVP TPAPG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle