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View Structure Prediction Details

Protein: CE04856
Organism: Caenorhabditis elegans
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04856.

Description E-value Query
Range
Subject
Range
gi|28202508, gi|... - gi|28210073|ref|NP_781017.1| acetyl-CoA acetyltransferase [Clostridium tetani E88], gi|28202508|gb|A...
360.0 [0..99] [459..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRKTSGSNI RRTKLEASAE IVAIDNKVDE AKTTKDLDDV LERIQALVQS VIDAPKLLES  60
   61 TGYVNSLREI MSRYFKAKML SLDGHAIGRG ITTSAALS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKDAFIVGAA RTPIGSFRSS LSSVTAPELA SVAIKAALER GAVKPSSIQE ANVFLGQVCH  60
   61 ANAGQASARQ AALGAGLDLS VAVTTVNKGW SSGMKAIILA AQQIQTGHQD LAIGGGMESM 120
  121 SQVPFFLARV EQSSNKYQVE QTVQDGISDF FDKQELCING ERTNGNIGPE VVAVNVKSKK 180
  181 GVEAVKQDDI TKIKKIKEGS VYSSIPIFPG GTISDKHIAA FTDGAAAVIL ASQEAVSEQN 240
  241 LKPLARILAY GDAATHQLDF AVAPTLLFPN LLQSAGVEQS DVAQWEVNEA FSCVPLAFIK 300
  301 KLGVDPSLVN PHGGAVSIGH PIGMSGASLI THLVHTLESG QIGVAALCDG DGGSSGMVIQ 360
  361 KL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.0
Match: 2ib7A
Description: No description for 2ib7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle