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View Structure Prediction Details

Protein: kin-2
Organism: Caenorhabditis elegans
Length: 376 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kin-2.

Description E-value Query
Range
Subject
Range
gi|74177287 - gi|74177287|dbj|BAE34559.1| unnamed protein product [Mus musculus]
285.0 [0..11] [374..135]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNYSGDIVF MSGGNEEDQL AQCQAYVQRH NIQQLVKEAI VVLCIHKPDN PVLFLKDHFE  60
   61 KLNEQRAQEG GNPDAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDDDIIVEPP KRSGGRRTGI SAEPIKEDDT EYKKVVIPKD DATRRSLESA MRKNLLFAHL  60
   61 EEDEQKTMYD AMFPVEKSAG ETIIEQGEEG DNFYVIDKGT VDVYVNHEYV LTINEGGSFG 120
  121 ELALIYGTPR AATVIAKTDV KLWAIDRLTY RRILMGSVTK KRKMYDEFLS KVQILADLDQ 180
  181 WERANVADAL ERCDFEPGTH VVEQGQPGDE FFIILEGEAN VLQKRSDDAP FDVVGHLGMS 240
  241 DYFGEIALLL DRPRAATVVA KTHLKCIKLD RNRFERVMGP VREILKRDVS NYNSYVKLMT 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.522879
Match: 1rgsA
Description: REGULATORY SUBUNIT OF CAMP DEPENDENT PROTEIN KINASE
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle