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View Structure Prediction Details

Protein: glb-16
Organism: Caenorhabditis elegans
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glb-16.

Description E-value Query
Range
Subject
Range
gi|187026150, gi... - gi|39594123|emb|CAE70233.1| Hypothetical protein CBG16720 [Caenorhabditis briggsae], gi|187026150|em...
gi|157770548 - gi|157770548|ref|XP_001677094.1| Hypothetical protein CBG16720 [Caenorhabditis briggsae AF16]
216.0 [0..1] [322..1]

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Predicted Domain #1
Region A:
Residues: [1-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSVSSSRTV RKKTGGGSVD SNMEDGKQAR KSSSMPSIYD LQQQAAPPTP ALKHYIYDTR  60
   61 LSKIQKRAIR FTWHRLQTRN GGKRVENVFE EVFDKLVKNL PNIRDMFSTR MFLCAMSRGT 120
  121 TSTLRDHSKN CVKMIDSVIK NFDVEKSKRT DTSSENDPRV IGRAHSILKP YGLAGNYWEK 180
  181 FGEVMIDVVL AQEAVRDLPG AGQAWVIFTA CLVDQMRAGF DENRKTDHEA QMKKNTVLHH 240
  241 ATQQLLEDNV ASTSATTASS GNGECSSSNQ PSTSSNQPLA CPFARMSLTP KDARVIESLS 300
  301 GSGGSGSSGN GDISDLSGTI YL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.0
Match: 1cqxA
Description: Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.52421953607929 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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