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View Structure Prediction Details

Protein: CE04558
Organism: Caenorhabditis elegans
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04558.

Description E-value Query
Range
Subject
Range
gi|1083485, gi|5... - gi|587484|emb|CAA57732.1| protein-tyrosine-phosphatase [Mus musculus], pir||S50893 protein-tyrosine-...
341.0 [0..2] [318..1322]

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Predicted Domain #1
Region A:
Residues: [1-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIYREESQQ TTVVGEPVDE FVHLQTTRGK ETYQQDLDDM NLDDEKIERF IRNGEKNRFT  60
   61 NVTCFDEILD RENQEFFVHA NTFRTPYGNF LISQAPNDST NADHLHLMWI YNVQTVVCLV 120
  121 LPEEAGGYFV PKEGETFTSF QKYQIKTIGI FDEKQGVTVY QCELKSYKAP KKLNRRMVYI 180
  181 ICCDTSVGSI RSPRQQTVIM EYMWAFEETN AIENEVALAD ATTTVLVHGI AGTRRCASFV 240
  241 VAAVMCKQLL ETGQFSAMET WFEMRKRRAH TCTRKHDFFS SVYTFFAFCV QSSAVSETNE 300
  301 NYAKTMEIVK DLLVKKNKEE KND

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.154902
Match: 2fh7A
Description: Crystal structure of the phosphatase domains of human PTP SIGMA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle