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View Structure Prediction Details

Protein: dpy-13
Organism: Caenorhabditis elegans
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dpy-13.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
248.0 [0..47] [301..1384]

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Predicted Domain #1
Region A:
Residues: [1-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIDTKIKAY RFVAYSAVVF SVIAVLSVCI TLPIVYNYVH TVRRQLHNEA LTCKGSMKDV  60
   61 WADVHHLRVD AASNRTARAV RYGRDDAAAG NGPNFDSGCE GCCQPGPQGA PGAPGKPGRP 120
  121 GKPGAPGFPG NPGKAPQKPC EEITPPPCKP CPQGPPGAPG LPGDQGDKGE AGQPGQPGSD 180
  181 AAPGEQGPKG PNGAPGKPGA PGAPGDEGLP AVCEPVQKGE PGSTGEPGPV GPPGPSGQPG 240
  241 NDGTPGQPGP KGPPGPDGKP GADGNPGQPG PVGPPGTPGE RGICPKYCAI DGGIFFEDGT 300
  301 RR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.30103
Match: 1y0fB
Description: No description for 1y0fB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle