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View Structure Prediction Details

Protein: dpy-8
Organism: Caenorhabditis elegans
Length: 452 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dpy-8.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
413.0 [0..46] [436..1404]

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Predicted Domain #1
Region A:
Residues: [1-452]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDFYDVAVA SIVLSTFTLV VAVFSVPMLF HKSDNVLLEI SSFSDGIKAK SDLVWNELME  60
   61 IKQGDAVPGI QYFSRKARSN WMGGAFCKGC FLLSCPQGPP GPPGAPGPDG QPGDAGRQGR 120
  121 SGDDGFDIQP ESEPELPCVI CPAGPPGPRG AQGERGMTGN PGMAGMQGTI GMEGVDGGPG 180
  181 LPGPPGPKGE RGPLGPYGPP GDTVVAGVGI KGPLGPPGPQ GMKGPPGPSG KGSNQPGQPG 240
  241 QPGDIGGIGK TGKMGGYGME GPAGPPGDPG MPASYCPSDC GVQPILTEMF PTPFTPTAGY 300
  301 SNMQRPAAPS RPLAHPEYAD GSAPAHLPHS GASDSAAASE VDAPAPHQHR KSHRLRPSHQ 360
  361 QQYGDEQNNA VADAGRSVNA PEYGDGSAPS HMPSHRAHHH PNSASQNYVD PERGSDTAAA 420
  421 DAYANRMHDF QDFERKWRKK LLQRRLRMMK RQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.154902
Match: 1y0fB
Description: No description for 1y0fB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle