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View Structure Prediction Details

Protein: CE04006
Organism: Caenorhabditis elegans
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04006.

Description E-value Query
Range
Subject
Range
MK16B_XENLA - Protein MAK16 homolog B OS=Xenopus laevis GN=mak16-b PE=2 SV=1
357.0 [0..1] [322..1]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQCDDVTWNI LNKGQCAYKA WTKPKMFCKN EMNLTGLCNR ASCPLANSQY ATVREENGVC  60
   61 YLYAKVVERS HYPRRLWEKT KLSKDMNKAL EQISDQLLHW SEYVRHKCKA RLIRIHQYLI 120
  121 RMRKMAVRGN QKKLIPIGRK VERREKRREE KALVAAKLDH AIEKELLARL KQGTYGDVYN 180
  181 F

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [182-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQEAFEQMLE NTEKELEVEQ ELEQDDADTG ETQFVADFDS SDDEDQDMED GGDGHWSPGD  60
   61 TDSENEDNWQ PEQEQEDSDE DDEEGGDEPM EIEEPPKKKV KKEPKKKTGK KAADGKKKKL 120
  121 KKRAHVEIEY EEETEPRQRV KA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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