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View Structure Prediction Details

Protein: pdi-2
Organism: Caenorhabditis elegans
Length: 493 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pdi-2.

Description E-value Query
Range
Subject
Range
gi|46249431, gi|... - gi|46249433|gb|AAS84455.1| protein disulfide isomerase [Ancylostoma caninum], gi|46249431|gb|AAS8445...
401.0 [0..1] [493..1]

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Predicted Domain #1
Region A:
Residues: [1-493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRLVGLFFL VLGASAAVIE EEENVIVLTK DNFDEVINGN EFILVEFYAP WCGHCKSLAP  60
   61 EYAKAATQLK EEGSDIKLGK LDATVHGEVS SKFEVRGYPT LKLFRNGKPQ EYNGGRDHDS 120
  121 IIAWLKKKTG PVAKPLADAD AVKELQESAD VVVIGYFKDT TSDDAKTFLE VAAGIDDVPF 180
  181 GISTEDAVKS EIELKGEGIV LFKKFDDGRV AFDEKLTQDG LKTWIQANRL ALVSEFTQET 240
  241 ASVIFGGEIK SHNLLFVSKE SSEFAKLEQE FKNAAKQFKG KVLFVYINTD VEENARIMEF 300
  301 FGLKKDELPA IRLISLEEDM TKFKPDFEEI TTENISKFTQ NYLDGSVKPH LMSEDIPEDW 360
  361 DKNPVKILVG KNFEQVARDN TKNVLVEFYA PWCGHCKQLA PTWDKLGEKF ADDESIVIAK 420
  421 MDSTLNEVED VKIQSFPTIK FFPAGSNKVV DYTGDRTIEG FTKFLETNGK EGAGASEEEK 480
  481 AEEEADEEGH TEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.69897
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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