| Protein: | CE03913 |
| Organism: | Caenorhabditis elegans |
| Length: | 471 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03913.
| Description | E-value | Query Range |
Subject Range |
|
|
229.0 | [0..8] | [469..64] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MKHEQRKHSD FWKRRKISQS AMVTQCESNG SVTSHNTSSA FQRNNSRYGV PIDSTAVKQV 60
61 YRVRSERLTN RVRITDRSLY LALFGVILML VESEITAEKF YGV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [104-400] |
1 11 21 31 41 51
| | | | | |
1 SKTHWISQSL RVGVTCSTIA LLYHIILYHL NDIVLELVDC GADDWRVVVT TERVIQFCIE 60
61 FICCGICPLP GSGEMKWTFI EPSLHKDGPS EERTVQTRNV DVPVDVILSC FMLCRSYLFA 120
121 RFMVLHSKQF QDASTRTLAA LNRIQVNFSF VIKTSLDQQP VLFLTTFTFI FWIIMSWMFV 180
181 QCERYGFSGK NPQSILYSNS LWFIAITFML NGYGDIVPQT NAGRFIAIFV GVVGAVISSI 240
241 LIAVISRNIL LSQGQRNVNN FMYDSKLARE HKEAAARVLQ HTWHIHKCLQ GSDGGNR
|
| Detection Method: | |
| Confidence: | 36.09691 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [401-471] |
1 11 21 31 41 51
| | | | | |
1 RLRTYQRKFL KAIHKFRSVK SEMREFSENN SQNNPQMTRL VTDMHTSMQR LLNVQDEMRM 60
61 QIEVVKFVLK K
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 2q0aA |
| Description: | No description for 2q0aA was found. |
