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View Structure Prediction Details

Protein: CE03141
Organism: Caenorhabditis elegans
Length: 199 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03141.

Description E-value Query
Range
Subject
Range
CE08854 - status:Partially_confirmed UniProt:O17682 protein_id:CAB03977.1
285.0 [0..1] [187..51]
gi|39579537, gi|... - gi|39579537|emb|CAE56088.1| Hypothetical protein CBG23672 [Caenorhabditis briggsae], gi|187040872|em...
260.0 [0..1] [176..1]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFIDKLPE ISRESKMEIT LLFFLTVEMV IVWISYLFIN PVENFIYNIW MFHLLIALFL  60
   61 SVFCKTLNFA IYRAGFRLLH MCYNVYILYT LGYMIVPFHI SLYFLFEFTY TVYGISYKQM 120
  121 DYPTTWIVIS LQKCGSRGTG PMHNSPIYPF TSVACETIRK ECILNEEKLD DSDGYYSALE 180
  181 DVLFPVVTPT NKLSERLIV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle