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View Structure Prediction Details

Protein: CE02990
Organism: Caenorhabditis elegans
Length: 465 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02990.

Description E-value Query
Range
Subject
Range
CE02996 - chitinase status:Partially_confirmed UniProt:Q17835 protein_id:CAA91148.1
360.0 [0..5] [464..7]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVLNSTSPL LQNRNITPKT SCLTQWKHLV KPCFILIAIL VFSAPVAYSL SELIMIARHK  60
   61 SPTVSNLIKI VILSSKKSRT MIKTKSSTAT KYVGLPPLLD APNSNEA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [108-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSPPAALCGK RIVGYFAEFE NSGLTRKQLQ MLTHIIYLFA IPRNGVITIV DDRSLRKFEE  60
   61 MKSNAREASS TLKIMISIGG HYNSRSFSGL VFNETSRTVF VNSIVSFVEK YDIDGIEMFW 120
  121 MWPRYRDKNN YLMFIQELRY AFTELQNKLN RKEDFVISLV ASSNLNLLFN LVEFLNSVDF 180
  181 FGIYLFNSYS YQVGPDSPLY GGGSRNVDEI MKYYICKTGQ PSKFNIIISF HATYWEGTDL 240
  241 PLRDDSDNIW KVNESGRLAV ALRWRELPHH KWNLENIKFH NLTKTSYIWI PGPPTRFLTL 300
  301 EDEQSLREKN RYVADHNIGG ITMWTIDQDD DDHTLLKVVS SAELCTGEEK NTIKYNCH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.39794
Match: 1wawA
Description: Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.00445818053203 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle