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View Structure Prediction Details

Protein: CE02987
Organism: Caenorhabditis elegans
Length: 505 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02987.

Description E-value Query
Range
Subject
Range
SCP34_ARATH - Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2
409.0 [0..13] [498..42]

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Predicted Domain #1
Region A:
Residues: [1-505]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWWTSLVFSV LLFDLIFISN CDYIHLPGNS DIPDLKLQSG YLNANENGTQ KMFYFLLEAR  60
   61 DIPVGEASLI IWFNGGPGCS SLSAFFEEFG PLYVNFGGKS LFENVHSWYH KANILFLESP 120
  121 IGVGFSYDTE QSNFTKVNDD SIAEQNFNSV IDFFQRKHSS YVNHDFFIAA ESYGGVYGPM 180
  181 LSALVVDSIS KREFPNENFK GLIIGNGFMN VKLSTNTMIL WSAYHDRTSP DEWDEIKEKC 240
  241 ATSGAHDVDY YDFMQFMKTT NKMDYLADNS TECGRLIEPL LGQFSETFDG YDFFNYYHDC 300
  301 YTNFSIPNAT DPIKETLAQI PRRRISALFN KHSTDGQASY RCWADDALHK YLNLKEVQNA 360
  361 LGIDRAWKDR KKKWEVCNMP IYDQYVMTHQ DMTPFFSKIF DKFTGPAFRV LIYSGDIDTA 420
  421 CNYLADGYFT LKHGPWYHSE HKVIAGNFMR YEGANHLGSK LSIDVVTVKG SGHFVPLDRP 480
  481 GPALQMVHNF LTGKPGKMTN YTSPV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 108.0
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle