YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE02840
Organism: Caenorhabditis elegans
Length: 147 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02840.

Description E-value Query
Range
Subject
Range
CE02841 - status:Predicted UniProt:Q9GYM0 protein_id:AAG00001.1
174.0 [0..1] [147..1]
gi|157760885 - gi|157760885|ref|XP_001672785.1| Hypothetical protein CBG22438 [Caenorhabditis briggsae AF16]
gi|39584564, gi|... - gi|39584564|emb|CAE74642.1| Hypothetical protein CBG22438 [Caenorhabditis briggsae], gi|187021836|em...
157.0 [0..1] [147..1]

Back

Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSIVFFVVL FGSIYCEGCH VQIRCPCPDM LETLVQFPVA TLYSEGAGCT RNVTCTADKY  60
   61 QSLSFMWSET EIPRPDKADE YPLALTPQPR TGEYVDMFSY FGVVCEDDGW YATQYPNGVT 120
  121 YEYESEYHTI ESSEVNGKKS KILFITW

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 8.142668
Match: PF02343.7
Description: No description for PF02343.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle