| Protein: | CE02524 |
| Organism: | Caenorhabditis elegans |
| Length: | 790 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02524.
| Description | E-value | Query Range |
Subject Range |
|
|
498.0 | [0..545] | [790..15] |
|
Region A: Residues: [1-394] |
1 11 21 31 41 51
| | | | | |
1 MDVIGNITDL SPTVSGIPDE CGLEPHDFLE VKFFLISVVG TLIGLFGLFG NATTALILTR 60
61 PSMRNPNNLF LTALAVFDSC LLITAFFIYA MEYIIEYTAA FDLYVAWLTY LRFAFALSHI 120
121 SQTGSVYITV AVTIERYLAE FSRLIFQVTV NPSCPDGSNW QSYILLPSAM ASNPIYQQVY 180
181 SLWVTNFVMV FFPFLTLLLF NAIIAYTIRQ SLEKYDFHNQ KSVVAALSAS VNLPRNIAGY 240
241 CPSDCLCHVP LSSFTLRGLA PRRTVVYDCS RGSASSVATS LTSPESFRIS SRNELKEKSR 300
301 EATLVLVIIV FIFLGCNFWG FVLTLLERIM GQETLMVEHH IFYTFSREAI NFLAIINSSI 360
361 NFVIYLLFGK DFRKELVVVY GCGIRGISLR LPVQ
|
| Detection Method: |  |
| Confidence: | 53.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [395-497] |
1 11 21 31 41 51
| | | | | |
1 DKFVIWRHWK RTKSRISMNT TNRTRHKISL PQTLVEHANL ERLEETRFLA HHEDGVQTQV 60
61 SPIHALRNGS TPKIDTLQDL TSNGRPCKTS IIDDNGTVGK PRC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [498-790] |
1 11 21 31 41 51
| | | | | |
1 NAFSIKIYLS LFNAQKMKIL VNILILIRIT SGMLYDGKYF DMKDRIRAEC IIKKAMSDYK 60
61 YLGNNDKSVN GEPCVPWIEV TESWLPTASD SQKMKKQASE SFHHSKCRNI KLSVVNPMYS 120
121 VSTPSAIETG IPSGIHGPWC FIDKVGTNGT ESFKYTPVTC FNYCDETKVA TDNEKMRLTE 180
181 NGYAILKQNY NPALLDPIEK LFTEYQFGNM KYYTFKKSRE QPPQYLELRQ KVFIALCLVF 240
241 CVVIAWILSC YFLKKHSQKL HQKKQKALEG FYESNNLADI KLQADLRRER EEA
|
| Detection Method: | |
| Confidence: | 0.968 |
| Match: | 1ki0A |
| Description: | Plasminogen |
Matching Structure (courtesy of the PDB): |
|
