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View Structure Prediction Details

Protein: chhy-1
Organism: Caenorhabditis elegans
Length: 458 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for chhy-1.

Description E-value Query
Range
Subject
Range
gi|39587090, gi|... - gi|39587090|emb|CAE57557.1| Hypothetical protein CBG00535 [Caenorhabditis briggsae], gi|187039001|em...
gi|157750052 - gi|157750052|ref|XP_001678739.1| Hypothetical protein CBG00535 [Caenorhabditis briggsae AF16]
574.0 [0..8] [458..11]

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Predicted Domain #1
Region A:
Residues: [1-458]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIVWYHQLL LVLLIFIGAA KGAQYIGSGA SQPNRTDVVW MVPSWTCKNE YSIDVEKYGI  60
   61 LQNEDQHFVG GKQFAIFYEH SFGKIPYFKA QNESDPKNGG LPQMGDLEAH LIQAEKDINE 120
  121 TIPDENFNGI AVIDIEEFRP MWELSWGPFS VYKTESIRLT RQQHPYWSTK QIEWQAERDY 180
  181 EKACQKFFIE TLRLGKRLRP NAKWGYYLFP KCNGDVGQKS DTDCSTLFQK FNDNLHWLWG 240
  241 ESTALFPSIY LYPSQKQNPE YNFVNSGALI TETKRIKRNY CPSCEIHVFT KIEYNPYYTP 300
  301 DDFYSKQNLA STLDLAIKMN ANSVVIWSTS QSIGSRCGSL QTYVDNTLGP YLQLTDRNLD 360
  361 KCRMERCEGR GECYLPRPKT NPAIYNFACR CERPYFGKSC EYRGRRMGVS MPKASQTPQV 420
  421 IPDVTAYFST SSNGTKKYNA PNQFYSRTGG DIKLARKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 147.0
Match: 2pe4A
Description: No description for 2pe4A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle