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View Structure Prediction Details

Protein: CE02209
Organism: Caenorhabditis elegans
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02209.

Description E-value Query
Range
Subject
Range
gi|109123034 - gi|109123034|ref|XP_001083499.1| PREDICTED: similar to protein tyrosine phosphatase, receptor type, ...
353.0 [0..1] [358..1647]

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Predicted Domain #1
Region A:
Residues: [1-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPTDFMRSF ISQSWLEDEI EGSIRQLAGT ESQTTQTGGE TAEGKEEEVN KNVTPEEAFK  60
   61 AVTVEGPELL NQMHTSAMTY PNTYDKFLNN MDMNRIPHLY CFDHSRVELA PQDGKDDFYN 120
  121 ASWVDGYSKK SAYIFAQAPF NDHTEYVFWR MVSERKPSMI LVFGDIDEKQ KRKAPYDISD 180
  181 RGFEKSFLHE FGAKSLEECE LKAKICRKFW PEKGSKKDFP ALSIQASDDH SETHMKTFNL 240
  241 TVTEKKQDHQ TVLMHFYEWA DASKLPEYML DMRASIKLQY IRSSKKTGVC IGPIMLVCAT 300
  301 GVEKCAIYAT IDIIVSRITE EHRVGFKETM SAIKMQRFGC FRTVGPYSTA CEMLMKFAVT 360
  361 TGVVHDAAIG EKPKPQKSIV GKGPKSGFIT KKKPSGK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.69897
Match: 2fh7A
Description: Crystal structure of the phosphatase domains of human PTP SIGMA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle