| Protein: | lgc-20 |
| Organism: | Caenorhabditis elegans |
| Length: | 454 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgc-20.
| Description | E-value | Query Range |
Subject Range |
|
|
331.0 | [0..9] | [431..72] |
|
Region A: Residues: [1-454] |
1 11 21 31 41 51
| | | | | |
1 MSFLVLFGAL LLIQTSEQMV QCRYTKNLTN RADGGDEHCL FYYLLNKEYE KSGSVHSLSA 60
61 YPPNSDEMTI TIENVLVKYV ELVKGSSYQF NVFGDIYLNW KDERMKWDKK GEFENYEHLY 120
121 IFNSSAIWTP HVIDHTLCSE GGCSYSVDDV DIYDDGTIYA RIQFKYLASC TVDYRKFPEE 180
181 DDSCCIFFTA FEPNVEQTTL VLEGKEKEKM NRPVYAQKIY EKEKQLSDIV QEHSPWVVVE 240
241 KTMSTSNLGG LKSLQVMQVC VRAEKQMSTV RVALLFPVTL ATYVMLASPL FGDLRTQIYV 300
301 KLFSLHIQTL CFLYLCTITP LNGFLGVRPR IYIFYELIFT ISFMSILVTL VVMALSRVKR 360
361 NVPPSHRLFL SAKLINRVVC CIEPERSDAY HRYVEEDTPE SRTTSEVSQQ QSVIRPGAEL 420
421 DYTQDWRHIY LAMNNMFSAL MFSVFLFMTF LEFF
|
| Detection Method: |  |
| Confidence: | 69.0 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
