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View Structure Prediction Details

Protein: CE01785
Organism: Caenorhabditis elegans
Length: 480 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01785.

Description E-value Query
Range
Subject
Range
gi|76640544 - gi|76640544|ref|XP_876878.1| PREDICTED: similar to C17G10.1 isoform 5 [Bos taurus]
506.0 [0..2] [473..4]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKSKAGGA SDKSKSPKLK KRRSVVLEPI HISPKYLEDK FKTEFKKGFE KSNGPFPHWQ  60
   61 LRNFVDNSDN VVEKIEDELQ NFEGWKRKEN DLYSLYQSDD LKSINPVENP AVFSFRQFLY 120
  121 KEVKEWLQNV SGVELTEQVD CNGSCYARTD SLLPHNDLIE TRRFAFVYYI TSADWDSEVN 180
  181 GGDLQLFNHD KKLQPTSVAA QFSPLRNSFM LFEVSEKSWH RVAEMLSEEP RLSINGWFHS 240
  241 TRRIEPKKPA VEAIQRFVPE AACK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.39794
Match: 2hbtA
Description: No description for 2hbtA was found.

Predicted Domain #2
Region A:
Residues: [265-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSKLISKEYL QKERQDEVQQ TFADSSELNL SKFIFEEIHD NAYSELISNP SCFETVGPVS  60
   61 KRHVARLDEE KSADLQNTKR IIQCLKSKNF AKLAAKLTGV TVTGAQTSVK VSRVEHGTYW 120
  121 VLGDEDAEQS STDGYCLDVH LFVQKTNWDD EAGGDLIYIE EGDTEELLRI SPSPNAASIV 180
  181 FREPGVISFM KYANCKSSDP FFLFTVSFYN VQVVED

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.32
Match: 2hbtA
Description: No description for 2hbtA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle