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View Structure Prediction Details

Protein: CE01697
Organism: Caenorhabditis elegans
Length: 369 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01697.

Description E-value Query
Range
Subject
Range
gi|114675584 - gi|114675584|ref|XP_001156507.1| PREDICTED: hypothetical protein [Pan troglodytes]
291.0 [0..2] [367..135]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGERKGQNFY YPPDFNYKTH KSLNGYHGTH ALRERAKKID QGILVIRFEM PFNIWCLGCH  60
   61 NHVGMGVRYN AEKKKIGMYY TTPLHEFRMK CHLCDNYYVI RTDPK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 12.318759
Match: PF04502.4
Description: No description for PF04502.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFDYELVEGC SRQELRFDPT DIAQIGAVDR GFTQKLAADA MFKKEHEAED KDKAATEEGR  60
   61 VDKLEWIQER MRDDFTANSF LRAQFRNEKK SLNETRARDA NLRDKLSIGT TQLLPETEED 120
  121 RRIASMMTRY RDTKTHDDHL ESSRDRIESR RIFRRPEETD TPSTSSGSSG GAVPSASERL 180
  181 KATMKAERDK RINASFSTAG TSSATQKLLG IKRKSASSLG VQIKKAAPEN SSLQDEEPAV 240
  241 EKPNISNPIS LIAQEYGNSS DDSD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.221849
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle