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View Structure Prediction Details

Protein: ttll-12
Organism: Caenorhabditis elegans
Length: 662 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ttll-12.

Description E-value Query
Range
Subject
Range
gi|157749163 - gi|157749163|ref|XP_001678295.1| Hypothetical protein CBG20224 [Caenorhabditis briggsae AF16]
gi|39580630, gi|... - gi|39580630|emb|CAE72906.1| Hypothetical protein CBG20224 [Caenorhabditis briggsae], gi|187023565|em...
633.0 [0..2] [662..1]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDRSAYPF STFLDQHSGQ LNASDVPPEL WHSLYKKLSD QTFDAGDHFQ IICEMNEDDE  60
   61 KTLFVRALED LHNNDEDNIF LIDHFMSFSS ESARKCVEST EGLVERLAGL FGIDTDSTEE 120
  121 VDETVEKIET SVEKEEAEHA KKISSETGNL PRHESVDARL SSYSVDDPKN ELTEKVLKAL 180
  181 WKYSQTYSVS YQLDNGEIEK KSVWYVMDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [210-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGTRVRHSTE PNVRIVPLMF LPQNCAYSIM FLTKPVNTDE EIMMDWASNV ITAQHPEWRK  60
   61 YIEQPWAAQD FSKETMIPDA PTLEYFTSGR NPDFLAGPTE QQTCQSAIFT SLPILKKRKI 120
  121 K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [331-662]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VYADDTQLTE HLKNHKVEYV DDIKKADVIW MIKHFHDYKQ LSEENPCGMI NQFPFESCIT  60
   61 VKDLLAACAM RDPAKNDWYQ LTYNLNTQLP EFVARFQNRE LNGQHNVWIV KPWNLARGMD 120
  121 MTVTEDLNQI IRMIETGPKI VCEYIPRPLL FPRPDNGNKV KFDLRYIVFL NGIAPVTAYV 180
  181 YNRFWIRFAI NEFSLSNFED VETHFTVFNY LDKEKILQMK CENFIETIEK AYPRIQWSEV 240
  241 QKDINLTIRK AIEAAAKEEA PRGVAPNVQS RAMYGVDIML QHGDNDVIKS TLLEINFMPD 300
  301 TTRACQYYPD FADTVFETLF LDEIDPTKVT PI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.11
Match: 1z2nX
Description: Inositol 1,3,4-trisphosphate 5/6-kinase complexed Mg2+/ADP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle