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View Structure Prediction Details

Protein: CE01422
Organism: Caenorhabditis elegans
Length: 309 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01422.

Description E-value Query
Range
Subject
Range
gi|76633302 - gi|76633302|ref|XP_872950.1| PREDICTED: similar to discs, large homolog-associated protein 4 isoform...
284.0 [0..7] [307..657]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNHASIPQP IRDLISKFNQ LDLCSAHKNE KEGIENIEPH KFIINQQPAF DEIDLKKDSN  60
   61 GNDDEKKDLK ISIDAESDSG ISGSSPASSK KNIDISKEEP KQDEEEEVTT TSTPSNGHEF 120
  121 QLLHDKVKAQ LQTKMNAAST DLEHADDY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [149-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEKCSDSLRA AHGNAHLLVR KKFSKFNELI GKNLNPIADD PMPVTVQDLE GFWVTIDMEL  60
   61 KGILKEFTKV EQYRAANWDP SAVKEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [235-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEIDSTTNRP PIAPKTRPVT AKKKAPIVSE ETRKKLAEQK ALAEQRRAEM RAQILQNRKA  60
   61 AKNQEDPAIG ASEEC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle