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View Structure Prediction Details

Protein: acdh-12
Organism: Caenorhabditis elegans
Length: 613 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acdh-12.

Description E-value Query
Range
Subject
Range
gi|39582312, gi|... - gi|39582312|emb|CAE67561.1| Hypothetical protein CBG13088 [Caenorhabditis briggsae], gi|187028918|em...
502.0 [0..1] [613..1]

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Predicted Domain #1
Region A:
Residues: [1-613]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSTLSKSAR LNQTRFIRLS HSAAAAKDAK PKKVAAVDSP SFVMNLFRGK AVTDQVFPYP  60
   61 LNMTDEQKET LGMVMSPLEK MLVEVNDVVK NDETSDIPRA VLDQFAELGT FGVLVPPELE 120
  121 GSGFNNSQMA RVAEIVGAYD LGFGVVMGAH QSIGYKGILL EGTDAQKQKY LPDLATGRKF 180
  181 AAFALTEPTT GSDASSVRTR AELSADGKHY VLNGGKIWIS NGGFADVFTV FAQTPVKQAD 240
  241 GSTKDKMSAF IVERAFGGVT SGPQEKKMGI KGSNTTEVHF DNLKIPVENL LGKEGEGFKV 300
  301 AMNILNNGRF GIPAACTGAM KHCIQKTVDH ITTRVQFGKK LQEFGNIQEK LVEMISKLYA 360
  361 TESIVYMLSS NMDRGIKEYQ LEAAIGKVLA SENAWLVCDD AIQVHGGMGF MRETGLERVL 420
  421 RDLRIFRIFE GANDVLRLFI ALTGAQHAGK HLAEQASGVG GLIGLAVSRV TGGNTGSNFG 480
  481 QVVDASLQDS AKVLDQQIAL FGQTVQGLLM KHKKGIIDRQ YEMHRVADAA INIYSSAAVL 540
  541 SRATYAIKNK SSSADFERKV ATYYVDKAMK SSNRFLKDAG SGVENASKVA TIESLAKEVC 600
  601 GNGGLTLQHP VEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 134.0
Match: 2uxwA
Description: No description for 2uxwA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle