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View Structure Prediction Details

Protein: gly-14
Organism: Caenorhabditis elegans
Length: 437 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gly-14.

Description E-value Query
Range
Subject
Range
gi|22749769, gi|... - gi|31981620|ref|NP_034924.2| mannoside acetylglucosaminyltransferase 1 [Mus musculus], gi|22749769|g...
420.0 [0..3] [437..14]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHISSKITFI FVLIYFSWNF YIQNGFTNKA IVKEELRLLK EMDEAGSRLE KLLKVEKEHM  60
   61 ERLSETMNRA TRLRITPNSN NPNNWP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPIPVIVFSC NRPDSVRAHV EKLIMYRPSA QQFPITVSQD CDNESVKKEV EKFGNSVNYV  60
   61 KHPPGESVKI EIPTNLQKFK PYYYISRHYK LALNHIFSNS NNYSSVIITE DDLDIAPDFF 120
  121 SYFSNTRYLL EKDPSLWCVT AWNDNGKPEN IDLKSNATLY RSDFFAGLGW MMTRKTWEEL 180
  181 EPIWPNGFWD DWMREPVQRK QRQCIRPEIS RTGMMKYGKE GTSKGQFFSD HLEKIKVNDL 240
  241 PVDFSQINLD YLQKNEFESR LSLDIRNAVP VDIDDITYPD WKPDYEGMKA IIYYTGRTDF 300
  301 VAKADRLSLM HDFKAGVPRT AYNGIVTCFY KGTRIFLVPD RSKVPGYDSS W

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.522879
Match: 1fo9A
Description: N-acetylglucosaminyltransferase I
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle