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View Structure Prediction Details

Protein: tbb-2
Organism: Caenorhabditis elegans
Length: 450 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbb-2.

Description E-value Query
Range
Subject
Range
gi|74223737 - gi|74223737|dbj|BAE28709.1| unnamed protein product [Mus musculus]
586.0 [0..1] [429..1]

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Predicted Domain #1
Region A:
Residues: [1-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREIVHVQAG QCGNQIGSKF WEVISDEHGI QPDGTFKGET DLQLERIDVY YNEANNGKYV  60
   61 PRAVLVDLEP GTMDSVRSGP FGQLFRPDNF VFGQSGAGNN WAKGHYTEGA ELVDNVLDVI 120
  121 RKEAEGCDCL QGFQLTHSLG GGTGSGMGTL LISKIREEYP DRIMSSFSVV PSPKVSDTVV 180
  181 EPYNATLSVH QLVENTDETY CIDNEALYDI CYRTLKLTNP TYGDLNHLVS LTMSGVTTCL 240
  241 RFPGQLNADL RKLAVNMVPF PRLHFFMPGF APLSAKGTQA YRALTVAELT QQMFDAKNMM 300
  301 AACDPRHGRY LTVAAMFRGR MSMREVDEQM LNVQNKNSSY FVEWIPNNVK TAVCDIPPRG 360
  361 LKMAATFVGN STAIQELFKR ISEQFTAMFR RKAFLHWYTG EGMDEMEFTE AESNMNDLIS 420
  421 EYQQYQEATA EDDVDGYAEG EAGETYESEQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 164.0
Match: 1ffxB
Description: Tubulin:stathmin-like domain complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle