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View Structure Prediction Details

Protein: tbb-4
Organism: Caenorhabditis elegans
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbb-4.

Description E-value Query
Range
Subject
Range
gi|74223737 - gi|74223737|dbj|BAE28709.1| unnamed protein product [Mus musculus]
594.0 [0..1] [429..1]

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Predicted Domain #1
Region A:
Residues: [1-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREIVHIQAG QCGNQIGAKF WEVISDEHGI DPTGAYNGDS DLQLERINVY YNEASGGKYV  60
   61 PRACLVDLEP GTMDSVRAGP FGQLFRPDNF VFGQSGAGNN WAKGHYTEGA ELVDNVLDVV 120
  121 RKEAESCDCL QGFQMTHSLG GGTGSGMGTL LISKIREEYP DRIMMTFSVV PSPKVSDTVV 180
  181 EPYNATLSVH QLVENTDETF CIDNEALYDI CFRTLKLTTP TYGDLNHLVS MTMSGVTTCL 240
  241 RFPGQLNADL RKLAVNMVPF PRLHFFMPGF APLTSRGSQQ YRSLTVPELT QQMFDAKNMM 300
  301 AACDPRHGRY LTVAAMFRGR MSMKEVDEQM LNVQNKNSSY FVEWIPNNVK TAVCDIPPRG 360
  361 VKMAATFVGN STAIQELFKR ISEQFTAMFR RKAFLHWYTG EGMDEMEFTE AESNMNDLVS 420
  421 EYQQYQEATA DDEGEFDEHD QDVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 166.0
Match: 1ffxB
Description: Tubulin:stathmin-like domain complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle