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View Structure Prediction Details

Protein: mnp-1
Organism: Caenorhabditis elegans
Length: 781 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mnp-1.

Description E-value Query
Range
Subject
Range
gi|114666415 - gi|114666415|ref|XP_001173625.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
531.0 [0..123] [776..2]

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Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPPPASPSK KAKSSWLLIA LIAVIIGIIL CAGVITFLTL FNKNGDGPDM DWQNATEVPL  60
   61 TTTSKATVST TTTQSATTPS TTTTRIEETT TTTSGAFDES VKNSEASTST IPTTEAVPTT 120
  121 TATDAPEIVM PVDVASILKD KTKDFEIVEK C

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.62
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #2
Region A:
Residues: [152-781]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AEIQALPVSC TPSQSPLTSD PSKFQPIHYV LNITIRDVRK PVLEGHMQLF ASTKDQVQAI  60
   61 SLHSVKIHNL ENRDRIHVVN CNTGETICVS RVHQIDDLIH LELAQSISSG VNLRVDIDGF 120
  121 ISADSGPHVF KQIPTAKWRV PQMIGSVFEP TSARHVFPSF DLHNQKSTFN LCLNHGPSMS 180
  181 AIANSLINPN VSTSGISCFE KTVPLIAQQL SFVAFEKTNP LFYNTTTMDG AYLPEIDMIF 240
  241 NLNAKNFKQY EWIHSEVSKV MALMSKWSGF SYPLTRLEIV VAPVQAGHSA LGVITLPAQA 300
  301 IAYQKHTSTH ETLIKEVIGQ WMEGVVTTEH TCFEKALIAY VEWKINEELQ IVKKTRKMEV 360
  361 SKIRPRNLNE TADSVRVLRQ IKSQSSNLCS PRFVEVFYTL DETYGQETVI GMIRVIFDKF 420
  421 AFSTATISDW ASAAETATGG RPEAGALIHQ WYRPSSTISR PVLRAVVSSN SVEFNQLTEE 480
  481 TWTVPLEISG SAGTQLAVIS EKKQAIPFVS SDYVVVDAGR KSHAFVVYDA DTYLRLIRCF 540
  541 GDSRCPSKEI GGIFSDLGAA LLANILPKPE NQDVAKWKSV FKFMAQQNIV EGTAACCVEH 600
  601 AIREMRKCSY WDIQDVCTKI DFNIVLAAVA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 120.0
Match: 2hpoA
Description: No description for 2hpoA was found.

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