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View Structure Prediction Details

Protein: CE00515
Organism: Caenorhabditis elegans
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE00515.

Description E-value Query
Range
Subject
Range
CE07085 - status:Predicted UniProt:Q19599 protein_id:AAG24065.1
554.0 [0..1] [419..22]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGTQTCIQN SRWTVVNLKN AFQAEGPWEF VLGNNSRSYL NLKRTYLVYT FNITDQNGAI  60
   61 VNIPNPITKD SLVYAPINNI AHSIVKNFSL HINSQLAYHN SS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYAYKAYFEN ALMYGKEIKN STLTAAGYFH EDEIGTPTSK GFLNRCGTGT TQVAANISLD  60
   61 LMNQPRVLLN SCNVKLTAYP NNSEFLIEAY NHGQQKFKFN VTDVYALVNE FDL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [216-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDGLSNELEA AIIEHKMIQY PMISSQVRSF YIDGGRFDAP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [256-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANTLFTSKMP RRLFLGLVSS EAYNGSFGTT PFNFKPYGVT DVHIDYCGQT IPGRPMNLDF  60
   61 ENNKFVEAYV QLQETLGHTR NNFSCNSID

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [345-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IGMFRSKGYT IFGFELSPVA QDNNLFELVR QTNVSVRLNF KKETPPGGLY CVVYAEFDQI  60
   61 FSLDFMRNPI VDSIV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle