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View Structure Prediction Details

Protein: asna-1
Organism: Caenorhabditis elegans
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for asna-1.

Description E-value Query
Range
Subject
Range
gi|71051259 - gi|71051259|gb|AAH98819.1| Asna1 protein [Rattus norvegicus]
236.0 [0..3] [342..3]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDQLEASIK NILEQKTLKW IFVGGKGGVG KTTCSCSLAA QLSKVRERVL LISTDPAHNI  60
   61 SDAFSQKFTK TPTLVEGFKN LFAMEIDSNP NGEGVEMGNI EEMLQNAAQN EGGSGGFSMG 120
  121 KDFLQSFAGG LPGIDEAMSF GEMIKLIDSL DFDVVVFDTA PTGHTLRLLQ FPTLLEKVFT 180
  181 KILSLQGMFG PMMNQFGGMF GMGGGSMNEM IEKMTTTLES VKKMNAQFKD PNCTTFVCVC 240
  241 IAEFLSLYET ERLIQELSKQ GIDTHNIIVN QLLFPDTDAN GTVSCRKCAS RQAIQSKYLT 300
  301 DIDELYEDFH VVKLPLLEAE VRGGPAILQF SERMVDPEAN KN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.522879
Match: 1f48A
Description: Arsenite-translocating ATPase ArsA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle