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View Structure Prediction Details

Protein: tbg-1
Organism: Caenorhabditis elegans
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbg-1.

Description E-value Query
Range
Subject
Range
gi|74223737 - gi|74223737|dbj|BAE28709.1| unnamed protein product [Mus musculus]
544.0 [0..4] [438..1]

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Predicted Domain #1
Region A:
Residues: [1-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGTGALMTV HVGQCGNQLA QAFWKSMVDE HGINERGQTT HEDDMNDKKD LLFYQADDDH  60
   61 YVPRAVLVDL EPRVINGMMQ SPNFSNLFNT DNIFMSDHGG GAGNNWASGY CQGQEVQEKI 120
  121 MDIIIREAEN TNNLDGILFT HSVSGGTGSG TGSLLLERLR EAFPKKVIQT YSVFANSDTS 180
  181 TDVVVHPYNW VLSMQRLIEN PDHVVVLDNA ALHRLAAGKF KTDTPTFDHI NSLVARIMST 240
  241 STAPYRFNSA MCPSIRYLDL APFPPMHFIQ SAISPVVDPN ENFTRKTSVA DVTRFLLKPT 300
  301 SMMVSTASRV RPNDCMLSAY MFLQGQIEAH TIMTAEQNVD FAIRRPPFYM LKPLRMMHAP 360
  361 LSPYVRPQYK VSGLLLNNST SVAPLFESLL SKYDKLRSKR AFIDKFEKID NFSLDMMDDA 420
  421 MHIVQDLLDE YKAVVQKDYL TRGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 116.0
Match: 1z5vA
Description: Crystal structure of human gamma-tubulin bound to GTPgammaS
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle