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View Structure Prediction Details

Protein: aar2
Organism: Schizosaccharomyces pombe
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aar2.

Description E-value Query
Range
Subject
Range
CT04_MOUSE, CT00... - (Q9D2V5) Protein c20orf4 homolog, Uncharacterized protein C20orf4 homolog OS=Mus musculus PE=2 SV=2
387.0 [0..2] [306..20]
C20orf4 - chromosome 20 open reading frame 4
383.0 [0..2] [306..20]
gi|114681744, gi... - gi|114681744|ref|XP_001166196.1| PREDICTED: similar to C20orf4 isoform 4 [Pan troglodytes], gi|11468...
383.0 [0..2] [306..20]
gi|109471180, gi... - gi|34860266|ref|XP_215901.2| PREDICTED: similar to Protein C20orf4 homolog [Rattus norvegicus], gi|1...
381.0 [0..2] [306..20]
AAR2_MACFA - Protein AAR2 homolog OS=Macaca fascicularis GN=AAR2 PE=2 SV=1
379.0 [0..2] [306..20]
AAR2_PONAB - Protein AAR2 homolog OS=Pongo abelii GN=AAR2 PE=2 SV=1
CT004_PONPY - Uncharacterized protein C20orf4 homolog - Pongo pygmaeus (Orangutan)
377.0 [0..2] [306..20]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIEFVGWLN TYYVGIDQSS YEASKLPGIR NVKGGIHLFT WSPTYPAGLI SGVFAMVHED  60
   61 MKYSIDFDSK SETASLQKLD VLYDENFYPF ESTKDWDLLT KFITVQDLQR IF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATEGEFFYLD TSTYVNADLV SQDPEFSKPS RDDKLLNFAE FNLRRSWSPS ATGPERSKQA  60
   61 IDKSFLFQRL VQSVWNDNPI SALAELSISF LSYSILSHYG ALEHWKNMLS LLLQSYELAE 120
  121 TEPEFYASFL ELFKLQLSSL SESDLETSAI FEKGVLLSCL DSLSERKVDG SFGSLVNEAI 180
  181 ENLLKTISEL LNSHEEQAGL MQKGDLYSAA DYEAEVHETG DYVIDVSTEE DPIH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle