YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC613.08
Organism:	Schizosaccharomyces pombe
Length:	325 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC613.08.

Description	E-value	Query Range	Subject Range
BCP1_EMENI - Protein bcp1 OS=Emericella nidulans GN=bcp1 PE=3 SV=1 BCP1_EMENI - Protein bcp1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=...	338.0	[0..44]	[324..1]
BCP1_GIBZE - Protein BCP1 OS=Gibberella zeae GN=BCP1 PE=3 SV=1 BCP1_GIBZE - Protein BCP1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=BCP1 PE=3 ...	326.0	[0..44]	[325..1]
BCP1_NEUCR - Protein bcp-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 98... BCP1_NEUCR - Protein bcp-1 OS=Neurospora crassa GN=bcp-1 PE=3 SV=1	324.0	[0..42]	[325..7]
BCP1_ASPFU - Protein bcp1 OS=Aspergillus fumigatus GN=bcp1 PE=3 SV=2 BCP1_ASPFU - Protein bcp1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bcp...	322.0	[0..44]	[323..1]
gi\|119175956, gi... - gi\|90298913\|gb\|EAS28544.1\| hypothetical protein CIMG_09748 [Coccidioides immitis RS], gi\|119175956\|r...	320.0	[0..38]	[324..27]
gi\|39952133, gi\|... - gi\|39952133\|ref\|XP_363783.1\| hypothetical protein MGG_01709 [Magnaporthe grisea 70-15], gb\|EAA56058....	314.0	[0..44]	[324..1]
BCP1_CHAGB - Protein BCP1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 197... BCP1_CHAGB - Protein BCP1 OS=Chaetomium globosum GN=BCP1 PE=3 SV=1	312.0	[0..43]	[324..3]
gi\|66850978, gi\|... - gi\|70997177\|ref\|XP_753342.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668509... gi\|159126933 - gi\|159126933\|gb\|EDP52049.1\| conserved hypothetical protein [Aspergillus fumigatus A1163]	310.0	[0..66]	[323..1]
gi\|111062889 - gi\|111062889\|gb\|EAT84009.1\| hypothetical protein SNOG_08841 [Phaeosphaeria nodorum SN15]	307.0	[0..38]	[324..6]
gi\|109463059, gi... - gi\|109463059\|ref\|XP_001055516.1\| PREDICTED: similar to BRCA2 and CDKN1A interacting protein [Rattus ...	303.0	[0..69]	[324..113]

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Predicted Domain #1

Region A:
Residues: [1-234]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCPLFKTYLL YILKICSIPC LAYVVNFLVC FVLFTNIKLD VRKMAKRHAE ENEDTVMSES  60
   61 LKVVDTDFIN VDFEFFDPQP IDFHAFKNLL KQLLGYDHTN VNLSALADLI LSQPLLGSTV 120
  121 KVDGNNSDPY AMLSVINLNT RRDEPVIKQL TSYIISRLAK SNSRLENELQ KLLEPNSGSQ 180
  181 VGLIVNERLI NMPVQVIPPM YNMLLEEMQW AINENEPYNF THYLLLSRTY TEIE

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [235-325]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKLMDDERPS KKGKKSKKTS GEEVMFFHPE DEQFREVAID IADYPFANQD FNPDANRVFQ  60
   61 DAGIKPQGEL LLMTNEDFKN LVPKLMEIYS A

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits