YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC5E4.05c
Organism:	Schizosaccharomyces pombe
Length:	378 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC5E4.05c.

Description	E-value	Query Range	Subject Range
gi\|68529012, gi\|... - gi\|94314231\|ref\|YP_587440.1\| alpha/beta hydrolase fold [Ralstonia metallidurans CH34], gi\|93358083\|g...	193.0	[0..4]	[268..12]
gi\|78066438, gi\|... - gi\|78066438\|ref\|YP_369207.1\| Alpha/beta hydrolase [Burkholderia sp. 383], gi\|77967183\|gb\|ABB08563.1\|...	193.0	[0..4]	[268..12]
gi\|91690961, gi\|... - gi\|91778301\|ref\|YP_553509.1\| non-heme chloroperoxidase [Burkholderia xenovorans LB400], gi\|91690961\|...	192.0	[0..3]	[267..11]
gi\|84358355 - gi\|84358355\|ref\|ZP_00983138.1\| COG0596: Predicted hydrolases or acyltransferases (alpha/beta hydrola... gi\|221174537, gi... - gi\|221205699\|ref\|ZP_03578714.1\| Non-heme chloroperoxidase (Chloride peroxidase) (CPO-F)(Chloroperoxi... gi\|221180683, gi... - gi\|221199398\|ref\|ZP_03572442.1\| Non-heme chloroperoxidase (Chloride peroxidase) (CPO-F)(Chloroperoxi...	190.0	[0..3]	[268..11]
gi\|18482507 - gi\|18482507\|gb\|AAL73575.1\| chloride peroxidase [Burkholderia cepacia]	189.0	[0..4]	[268..12]
gi\|118710467, gi... - gi\|170737439\|ref\|YP_001778699.1\| alpha/beta hydrolase fold [Burkholderia cenocepacia MC0-3], gi\|1698... gi\|107025528, gi... - gi\|67655162\|ref\|ZP_00452549.1\| Alpha/beta hydrolase fold [Burkholderia cenocepacia AU 1054], gi\|6709... gi\|116651291, gi... - gi\|67663049\|ref\|ZP_00460334.1\| Alpha/beta hydrolase fold [Burkholderia cenocepacia HI2424], gi\|67103...	186.0	[0..3]	[268..11]
gi\|32443910, gi\|... - gi\|32472673\|ref\|NP_865667.1\| non-heme chloroperoxidase [Rhodopirellula baltica SH 1], gi\|32443910\|em...	184.0	[0..2]	[268..10]
gi\|73539032, gi\|... - gi\|73539032\|ref\|YP_299399.1\| Alpha/beta hydrolase fold [Ralstonia eutropha JMP134], gi\|72122369\|gb\|A...	184.0	[0..3]	[269..11]
gi\|19914821, gi\|... - gi\|20089870\|ref\|NP_615945.1\| chloride peroxidase [Methanosarcina acetivorans C2A], gi\|19914821\|gb\|AA...	183.0	[0..3]	[268..11]

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Predicted Domain #1

Region A:
Residues: [1-273]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLYTKDWT DVKDKPVARV VFIHGFGEHV NAYPEFFEAL NERNIEVYTF DQRGFGHSRK  60
   61 GGPKKQGCTG GWSLVFPDLD YQILRASDTE LPLFLWGHSM GGGLALRYGI SGTHRHKLAG 120
  121 VIAQAPMLRC HPDTEPNFLL RKALTLVSKV HPNFLFDSDV QSQHITRDEA VNQRLQDDPL 180
  181 VSSVGSLQVF SDMLNRGTKT IELAPQFFLP LLITHGTDDN VTCSDSSKEF YENAGTKDKT 240
  241 YQSYPGFYHS LHIEKKPEVY EYLDKVAAWI YEH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.045757
Match:	1a8sA
Description:	CHLOROPEROXIDASE F/PROPIONATE COMPLEX
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.39629727416851	bayes_pls_golite062009
lipase activity	0.849473630399459	bayes_pls_golite062009
carboxylesterase activity	0.424330502936163	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.264183693934251	bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity	0.054530214464529	bayes_pls_golite062009
palmitoyl-CoA hydrolase activity	0.00303228391703936	bayes_pls_golite062009

Predicted Domain #2

Region A:
Residues: [274-378]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKPSETVKSE QETAVEHPKP TATTSAPSAS PTGVPVEEES HKATSDAVPP AEAKPEPVPA  60
   61 SAAERAPTSE STTVPETIVA STTKVISEPA PRVTTAATAD IVTNK

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.53
Match:	1pk8A
Description:	Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: